Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Hfm1D3Z4R1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hfm1D3Z4R1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hfm1D3Z4R1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Gm6415-201ENSMUST00000118488 348 ntBASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hfm1D3Z4R1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Hfm1D3Z4R1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Gm10499-201ENSMUST00000174094 934 ntBASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Mir7684-201ENSMUST00000183858 60 ntBASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC22.02■■□□□ 1.12
Hfm1D3Z4R1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Hfm1D3Z4R1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Hfm1D3Z4R1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC22.02■■□□□ 1.11
Hfm1D3Z4R1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hfm1D3Z4R1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Mir8102-201ENSMUST00000184148 139 ntBASIC22■■□□□ 1.11
Hfm1D3Z4R1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Hfm1D3Z4R1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hfm1D3Z4R1 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms