Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 BC021767-201ENSMUST00000126387 1716 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Gm37917-201ENSMUST00000194711 392 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Nsd1-205ENSMUST00000224693 852 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmcn1D3YXG0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Hmcn1D3YXG0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm16026-204ENSMUST00000162652 683 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm24514-201ENSMUST00000174961 285 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 AC159747.1-201ENSMUST00000219903 265 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm18624-201ENSMUST00000220966 658 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 CT009510.1-201ENSMUST00000227972 270 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm5187-201ENSMUST00000117317 991 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm15483-201ENSMUST00000120338 456 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm43830-201ENSMUST00000198760 1067 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Gm45195-201ENSMUST00000205597 1008 ntBASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmcn1D3YXG0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms