Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm12887B1AVM1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm12887B1AVM1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm12887B1AVM1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm12887B1AVM1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm12887B1AVM1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm12887B1AVM1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.82□□□□□ -0.36
Gm12887B1AVM1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms