Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm18666-201ENSMUST00000190039 958 ntBASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv3A0A0A6YYE2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm12085-201ENSMUST00000119263 940 ntBASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv3A0A0A6YYE2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.21□□□□□ -0.45
Trbv3A0A0A6YYE2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms