Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm10013-201ENSMUST00000106074 672 ntBASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav21-dv12A0A075B6C4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mir770-201ENSMUST00000103252 94 ntBASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav21-dv12A0A075B6C4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms