Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-1A0A075B644 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-1A0A075B644 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Gm27867-201ENSMUST00000184778 125 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Gm44454-201ENSMUST00000198541 138 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Mzt1-203ENSMUST00000227948 952 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-1A0A075B644 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Gm5864-201ENSMUST00000202263 970 ntBASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-1A0A075B644 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-1A0A075B644 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms