Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8n-2A0A075B633 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Gm27301-201ENSMUST00000184012 127 ntBASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav8n-2A0A075B633 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8n-2A0A075B633 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms