Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Trbv4A0A075B5I2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv4A0A075B5I2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Gm27357-201ENSMUST00000183754 135 ntBASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv4A0A075B5I2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv4A0A075B5I2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Gm15165-201ENSMUST00000118140 502 ntBASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv4A0A075B5I2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms