Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.19□□□□□ -0.46
PdfS4R2K0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PdfS4R2K0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.18□□□□□ -0.46
PdfS4R2K0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PdfS4R2K0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.17□□□□□ -0.46
PdfS4R2K0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdfS4R2K0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Mir7071-201ENSMUST00000184847 69 ntBASIC12.17□□□□□ -0.46
PdfS4R2K0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Gm4974-201ENSMUST00000209974 875 ntBASIC12.17□□□□□ -0.46
PdfS4R2K0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdfS4R2K0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdfS4R2K0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.16□□□□□ -0.46
PdfS4R2K0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.16□□□□□ -0.46
PdfS4R2K0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PdfS4R2K0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.16□□□□□ -0.46
PdfS4R2K0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdfS4R2K0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.16□□□□□ -0.46
PdfS4R2K0 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms