Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim3Q9R1R2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim3Q9R1R2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim3Q9R1R2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Gm27357-201ENSMUST00000183754 135 ntBASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Gm17807-201ENSMUST00000186869 298 ntBASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim3Q9R1R2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim3Q9R1R2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim3Q9R1R2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms