Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gm11950-201ENSMUST00000121615 838 ntBASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gm29707-201ENSMUST00000196325 491 ntBASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gm18421-201ENSMUST00000204122 625 ntBASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clcn2Q9R0A1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn2Q9R0A1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Clcn2Q9R0A1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn2Q9R0A1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Gm6623-201ENSMUST00000173570 544 ntBASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Gm21362-201ENSMUST00000194272 928 ntBASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn2Q9R0A1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms