Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.66■□□□□ 0.58
Scn11aQ9R053 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.65■□□□□ 0.58
Scn11aQ9R053 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.65■□□□□ 0.58
Scn11aQ9R053 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn11aQ9R053 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Scn11aQ9R053 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Gm10499-201ENSMUST00000174094 934 ntBASIC18.64■□□□□ 0.57
Scn11aQ9R053 Gm27494-201ENSMUST00000184735 189 ntBASIC18.64■□□□□ 0.57
Scn11aQ9R053 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.64■□□□□ 0.57
Scn11aQ9R053 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn11aQ9R053 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn11aQ9R053 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.64■□□□□ 0.57
Scn11aQ9R053 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.63■□□□□ 0.57
Scn11aQ9R053 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Gm11745-201ENSMUST00000121669 448 ntBASIC18.63■□□□□ 0.57
Scn11aQ9R053 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Mir7023-201ENSMUST00000185093 64 ntBASIC18.63■□□□□ 0.57
Scn11aQ9R053 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Grk6-207ENSMUST00000225925 2769 ntBASIC18.63■□□□□ 0.57
Scn11aQ9R053 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Gm5312-201ENSMUST00000203728 547 ntBASIC18.63■□□□□ 0.57
Scn11aQ9R053 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn11aQ9R053 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.62■□□□□ 0.57
Scn11aQ9R053 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.62■□□□□ 0.57
Scn11aQ9R053 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn11aQ9R053 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn11aQ9R053 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn11aQ9R053 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scn11aQ9R053 Gm16198-201ENSMUST00000118766 670 ntBASIC18.61■□□□□ 0.57
Scn11aQ9R053 Gm12428-201ENSMUST00000119844 727 ntBASIC18.61■□□□□ 0.57
Scn11aQ9R053 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn11aQ9R053 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.61■□□□□ 0.57
Scn11aQ9R053 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn11aQ9R053 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn11aQ9R053 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms