Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Gm44454-201ENSMUST00000198541 138 ntBASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clcf1Q9QZM3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Gm15165-201ENSMUST00000118140 502 ntBASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.39□□□□□ -0.11
Clcf1Q9QZM3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Gm36967-201ENSMUST00000193814 266 ntBASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clcf1Q9QZM3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clcf1Q9QZM3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms