Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.85■□□□□ 0.13
Shroom3Q9QXN0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm4995-201ENSMUST00000117247 432 ntBASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm11779-201ENSMUST00000118541 368 ntBASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm11594-201ENSMUST00000122313 162 ntBASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm5364-201ENSMUST00000216789 889 ntBASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shroom3Q9QXN0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom3Q9QXN0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom3Q9QXN0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom3Q9QXN0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shroom3Q9QXN0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shroom3Q9QXN0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Gm13036-201ENSMUST00000117799 748 ntBASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.82■□□□□ 0.12
Shroom3Q9QXN0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.81■□□□□ 0.12
Shroom3Q9QXN0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms