Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1aQ9QWF0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1aQ9QWF0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1aQ9QWF0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1aQ9QWF0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chaf1aQ9QWF0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1aQ9QWF0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms