Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh5Q9QUM7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.27■□□□□ 0.2
Msh5Q9QUM7 AC102542.1-201ENSMUST00000225204 1138 ntBASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.27■□□□□ 0.2
Msh5Q9QUM7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh5Q9QUM7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh5Q9QUM7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Msh5Q9QUM7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm8312-201ENSMUST00000119380 618 ntBASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm37722-201ENSMUST00000193757 208 ntBASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm43037-201ENSMUST00000196808 250 ntBASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 AC154616.1-201ENSMUST00000226995 804 ntBASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh5Q9QUM7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh5Q9QUM7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh5Q9QUM7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms