Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Trmt13-210ENSMUST00000198454 880 ntBASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Gm18421-201ENSMUST00000204122 625 ntBASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hmgn5Q9JL35 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn5Q9JL35 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Timm23-208ENSMUST00000226683 750 ntBASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn5Q9JL35 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn5Q9JL35 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn5Q9JL35 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn5Q9JL35 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn5Q9JL35 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgn5Q9JL35 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms