Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rhox4bQ9JI43 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rhox4bQ9JI43 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Gm13148-201ENSMUST00000118892 745 ntBASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rhox4bQ9JI43 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Rhox4bQ9JI43 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Gm27000-201ENSMUST00000182943 842 ntBASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Gm10517-202ENSMUST00000192970 758 ntBASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rhox4bQ9JI43 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms