Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm37856-201ENSMUST00000191634 999 ntBASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm18025-201ENSMUST00000221733 862 ntBASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube4bQ9ES00 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Gm12527-201ENSMUST00000117967 564 ntBASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Trmt13-210ENSMUST00000198454 880 ntBASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4bQ9ES00 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4bQ9ES00 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4bQ9ES00 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4bQ9ES00 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms