Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps35Q9EQH3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps35Q9EQH3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps35Q9EQH3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.85■□□□□ 0.13
Vps35Q9EQH3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps35Q9EQH3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms