Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Mir1199-201ENSMUST00000117015 119 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 App-207ENSMUST00000227737 2827 ntBASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim13Q9CYB0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim13Q9CYB0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim13Q9CYB0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim13Q9CYB0 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms