Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 AA414768-201ENSMUST00000121924 1257 ntBASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Gm25016-201ENSMUST00000158399 131 ntBASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc43Q9CR29 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc43Q9CR29 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc43Q9CR29 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms