Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chchd1Q9CQA6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Chchd1Q9CQA6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Zfp783-201ENSMUST00000095946 670 ntBASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chchd1Q9CQA6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chchd1Q9CQA6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12□□□□□ -0.49
Chchd1Q9CQA6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Chchd1Q9CQA6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms