Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Gm44450-201ENSMUST00000199528 114 ntBASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Krt88Q9CPR6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Krt88Q9CPR6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Krt88Q9CPR6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Krt88Q9CPR6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Krt88Q9CPR6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Krt88Q9CPR6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Krt88Q9CPR6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Krt88Q9CPR6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms