Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm27989-201ENSMUST00000184721 107 ntBASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh15Q99PJ1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gm16215-201ENSMUST00000161990 637 ntBASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh15Q99PJ1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh15Q99PJ1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gm25144-201ENSMUST00000179561 110 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Gm25352-201ENSMUST00000179815 110 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.78■□□□□ 0.44
Pcdh15Q99PJ1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Gm14722-201ENSMUST00000118943 689 ntBASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Gm9063-201ENSMUST00000223299 582 ntBASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh15Q99PJ1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh15Q99PJ1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms