Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Gm10052-201ENSMUST00000168019 960 ntBASIC15.46■□□□□ 0.07
Msh4Q99MT2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Gm7729-201ENSMUST00000050143 801 ntBASIC15.46■□□□□ 0.07
Msh4Q99MT2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.46■□□□□ 0.07
Msh4Q99MT2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Msh4Q99MT2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Msh4Q99MT2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Msh4Q99MT2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.45■□□□□ 0.06
Msh4Q99MT2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Gm17971-201ENSMUST00000190239 806 ntBASIC15.45■□□□□ 0.06
Msh4Q99MT2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Msh4Q99MT2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Msh4Q99MT2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Gm44430-201ENSMUST00000203376 995 ntBASIC15.43■□□□□ 0.06
Msh4Q99MT2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.43■□□□□ 0.06
Msh4Q99MT2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Msh4Q99MT2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.42■□□□□ 0.06
Msh4Q99MT2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh4Q99MT2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms