Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clcc1Q99LI2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
Clcc1Q99LI2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Gm7230-201ENSMUST00000173026 815 ntBASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Mir5126-201ENSMUST00000175513 77 ntBASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Gm9172-201ENSMUST00000212092 954 ntBASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Gm5364-201ENSMUST00000216789 889 ntBASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcc1Q99LI2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Gm11780-201ENSMUST00000136880 516 ntBASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.63■□□□□ 0.09
Clcc1Q99LI2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcc1Q99LI2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Gm6089-201ENSMUST00000197666 938 ntBASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcc1Q99LI2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clcc1Q99LI2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms