Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1aQ921W0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1aQ921W0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1aQ921W0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.01□□□□□ -0.17
Chmp1aQ921W0 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.01□□□□□ -0.17
Chmp1aQ921W0 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1aQ921W0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Gm16042-201ENSMUST00000204813 1247 ntBASIC14□□□□□ -0.17
Chmp1aQ921W0 Timm23-208ENSMUST00000226683 750 ntBASIC14□□□□□ -0.17
Chmp1aQ921W0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms