Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Gm27459-201ENSMUST00000184860 107 ntBASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha9Q91Y11 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdha9Q91Y11 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
Pcdha9Q91Y11 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha9Q91Y11 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gm43347-201ENSMUST00000200226 580 ntBASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gm18622-201ENSMUST00000219361 595 ntBASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha9Q91Y11 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Gm24589-201ENSMUST00000116692 94 ntBASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha9Q91Y11 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms