Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhac1Q91Y10 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Gm11336-201ENSMUST00000118168 334 ntBASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Gm6659-201ENSMUST00000174752 547 ntBASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Gm36967-201ENSMUST00000193814 266 ntBASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhac1Q91Y10 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gm9013-201ENSMUST00000132939 882 ntBASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhac1Q91Y10 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhac1Q91Y10 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms