Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Gm14579-201ENSMUST00000117068 283 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Gm29288-201ENSMUST00000191582 901 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 AC129323.1-201ENSMUST00000216733 470 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Zmym2-202ENSMUST00000223669 1281 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb20Q91XZ9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm5133-201ENSMUST00000118940 1255 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 AC154616.1-201ENSMUST00000226995 804 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb20Q91XZ9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb20Q91XZ9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb20Q91XZ9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb20Q91XZ9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb20Q91XZ9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb20Q91XZ9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm37533-201ENSMUST00000193848 545 ntBASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm7461-201ENSMUST00000058918 827 ntBASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb20Q91XZ9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms