Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Gm15794-201ENSMUST00000120182 631 ntBASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 AA414768-201ENSMUST00000121924 1257 ntBASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb4Q91XX6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Gm25016-201ENSMUST00000158399 131 ntBASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb4Q91XX6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Gm12106-201ENSMUST00000116006 1200 ntBASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb4Q91XX6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Gm37319-201ENSMUST00000193500 636 ntBASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Gm45328-201ENSMUST00000210942 917 ntBASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Gm18515-201ENSMUST00000219755 797 ntBASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb4Q91XX6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb4Q91XX6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms