Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usb1Q91W78 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Usb1Q91W78 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.67■□□□□ 0.1
Usb1Q91W78 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usb1Q91W78 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Gm44430-201ENSMUST00000203376 995 ntBASIC15.66■□□□□ 0.1
Usb1Q91W78 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.66■□□□□ 0.1
Usb1Q91W78 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.66■□□□□ 0.1
Usb1Q91W78 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Usb1Q91W78 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usb1Q91W78 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm15372-201ENSMUST00000120729 834 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Rprl3-201ENSMUST00000157400 290 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.65■□□□□ 0.1
Usb1Q91W78 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.65■□□□□ 0.1
Usb1Q91W78 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usb1Q91W78 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Usb1Q91W78 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Usb1Q91W78 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Usb1Q91W78 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Usb1Q91W78 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Usb1Q91W78 Gm13312-201ENSMUST00000119631 718 ntBASIC15.64■□□□□ 0.09
Usb1Q91W78 Gm12895-201ENSMUST00000122214 226 ntBASIC15.64■□□□□ 0.09
Usb1Q91W78 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Usb1Q91W78 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usb1Q91W78 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.63■□□□□ 0.09
Usb1Q91W78 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms