Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm11764-201ENSMUST00000120221 623 ntBASIC15.64■□□□□ 0.09
Vsx1Q91V10 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm43438-201ENSMUST00000198133 379 ntBASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx1Q91V10 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gm20949-201ENSMUST00000206478 952 ntBASIC15.63■□□□□ 0.09
Vsx1Q91V10 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vsx1Q91V10 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Gm27300-201ENSMUST00000184085 97 ntBASIC15.62■□□□□ 0.09
Vsx1Q91V10 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Gm27335-201ENSMUST00000184758 97 ntBASIC15.62■□□□□ 0.09
Vsx1Q91V10 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vsx1Q91V10 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Gm45167-201ENSMUST00000208007 322 ntBASIC15.61■□□□□ 0.09
Vsx1Q91V10 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.61■□□□□ 0.09
Vsx1Q91V10 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.61■□□□□ 0.09
Vsx1Q91V10 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Vsx1Q91V10 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vsx1Q91V10 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vsx1Q91V10 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vsx1Q91V10 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vsx1Q91V10 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vsx1Q91V10 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vsx1Q91V10 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms