Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.68□□□□□ -0.22
Tram1Q91V04 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tram1Q91V04 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.68□□□□□ -0.22
Tram1Q91V04 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.68□□□□□ -0.22
Tram1Q91V04 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tram1Q91V04 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.68□□□□□ -0.22
Tram1Q91V04 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tram1Q91V04 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gm18284-201ENSMUST00000172604 624 ntBASIC13.67□□□□□ -0.22
Tram1Q91V04 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tram1Q91V04 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tram1Q91V04 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tram1Q91V04 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tram1Q91V04 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Gm12085-201ENSMUST00000119263 940 ntBASIC13.66□□□□□ -0.22
Tram1Q91V04 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.66□□□□□ -0.22
Tram1Q91V04 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.66□□□□□ -0.22
Tram1Q91V04 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tram1Q91V04 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tram1Q91V04 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Tram1Q91V04 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tram1Q91V04 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Tram1Q91V04 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tram1Q91V04 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tram1Q91V04 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tram1Q91V04 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tram1Q91V04 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.64□□□□□ -0.23
Tram1Q91V04 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tram1Q91V04 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.64□□□□□ -0.23
Tram1Q91V04 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tram1Q91V04 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
Tram1Q91V04 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tram1Q91V04 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tram1Q91V04 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tram1Q91V04 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tram1Q91V04 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms