Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Gm5587-201ENSMUST00000206270 674 ntBASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps39Q8R5L3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vps39Q8R5L3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Gm10231-201ENSMUST00000181584 441 ntBASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Gm10175-202ENSMUST00000208752 441 ntBASIC15.89■□□□□ 0.13
Vps39Q8R5L3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.89■□□□□ 0.13
Vps39Q8R5L3 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps39Q8R5L3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps39Q8R5L3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms