Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.07■□□□□ 0.16
Slf1Q8R3P9 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slf1Q8R3P9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Slf1Q8R3P9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slf1Q8R3P9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.04■□□□□ 0.16
Slf1Q8R3P9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slf1Q8R3P9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Slf1Q8R3P9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slf1Q8R3P9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slf1Q8R3P9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slf1Q8R3P9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms