Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zcchc9Q8R1J3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.79■□□□□ 0.12
Zcchc9Q8R1J3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.78■□□□□ 0.12
Zcchc9Q8R1J3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms