Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vopp1Q8R1C3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vopp1Q8R1C3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vopp1Q8R1C3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vopp1Q8R1C3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vopp1Q8R1C3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Gm15427-201ENSMUST00000117288 531 ntBASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vopp1Q8R1C3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Gm9385-201ENSMUST00000117563 472 ntBASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vopp1Q8R1C3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Gm26308-201ENSMUST00000157768 69 ntBASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vopp1Q8R1C3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms