Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm9103-201ENSMUST00000119371 405 ntBASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Gm15372-201ENSMUST00000120729 834 ntBASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Gm10819-201ENSMUST00000099988 561 ntBASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfwd3Q8CIK8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Dancr-204ENSMUST00000132389 2347 ntBASIC14.91□□□□□ -0.02
Rfwd3Q8CIK8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Gm28033-201ENSMUST00000184224 96 ntBASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Gm44454-201ENSMUST00000198541 138 ntBASIC14.9□□□□□ -0.02
Rfwd3Q8CIK8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms