Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf31Q8CCF0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Gm12350-201ENSMUST00000121208 462 ntBASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 AW822252-206ENSMUST00000208904 237 ntBASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf31Q8CCF0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf31Q8CCF0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf31Q8CCF0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf31Q8CCF0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf31Q8CCF0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms