Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim4Q8C1Q6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Gm44430-201ENSMUST00000203376 995 ntBASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Smim4Q8C1Q6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smim4Q8C1Q6 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms