Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm7593-201ENSMUST00000187246 644 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm23984-201ENSMUST00000157139 203 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm24158-201ENSMUST00000175263 71 ntBASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chd9Q8BYH8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd9Q8BYH8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Gm16570-201ENSMUST00000161951 436 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Gm20553-201ENSMUST00000204205 844 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Gm5177-201ENSMUST00000183092 997 ntBASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd9Q8BYH8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms