Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Gm43935-201ENSMUST00000203569 1050 ntBASIC22.32■■□□□ 1.16
Usp47Q8BY87 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp47Q8BY87 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Usp47Q8BY87 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Usp47Q8BY87 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC22.29■■□□□ 1.16
Usp47Q8BY87 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm9682-201ENSMUST00000197505 556 ntBASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm42670-201ENSMUST00000201816 1292 ntBASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp47Q8BY87 Gm4899-201ENSMUST00000178708 719 ntBASIC22.28■■□□□ 1.16
Usp47Q8BY87 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Gm45167-201ENSMUST00000208007 322 ntBASIC22.28■■□□□ 1.16
Usp47Q8BY87 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Usp47Q8BY87 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Gm11779-201ENSMUST00000118541 368 ntBASIC22.27■■□□□ 1.16
Usp47Q8BY87 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC22.27■■□□□ 1.16
Usp47Q8BY87 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.27■■□□□ 1.16
Usp47Q8BY87 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp47Q8BY87 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms