Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf4Q8BQZ5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.41■□□□□ 0.06
Cpsf4Q8BQZ5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf4Q8BQZ5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Gm17807-201ENSMUST00000186869 298 ntBASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf4Q8BQZ5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf4Q8BQZ5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms