Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Gm15590-201ENSMUST00000078419 552 ntBASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38bQ80SY5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Gm27321-201ENSMUST00000185021 205 ntBASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38bQ80SY5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Gm4535-201ENSMUST00000182274 558 ntBASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Chchd1-203ENSMUST00000224633 557 ntBASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Gm10355-201ENSMUST00000097146 517 ntBASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38bQ80SY5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Mir8117-201ENSMUST00000184773 107 ntBASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prpf38bQ80SY5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prpf38bQ80SY5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms