Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.61□□□□□ -0.07
Pif1Q80SX8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pif1Q80SX8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pif1Q80SX8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.6□□□□□ -0.07
Pif1Q80SX8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Gm24513-201ENSMUST00000174964 138 ntBASIC14.6□□□□□ -0.07
Pif1Q80SX8 Gm27397-201ENSMUST00000184997 107 ntBASIC14.6□□□□□ -0.07
Pif1Q80SX8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.6□□□□□ -0.07
Pif1Q80SX8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pif1Q80SX8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.59□□□□□ -0.07
Pif1Q80SX8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.59□□□□□ -0.07
Pif1Q80SX8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.59□□□□□ -0.07
Pif1Q80SX8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pif1Q80SX8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pif1Q80SX8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pif1Q80SX8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pif1Q80SX8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.58□□□□□ -0.08
Pif1Q80SX8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pif1Q80SX8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.58□□□□□ -0.08
Pif1Q80SX8 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.58□□□□□ -0.08
Pif1Q80SX8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pif1Q80SX8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.57□□□□□ -0.08
Pif1Q80SX8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pif1Q80SX8 Gm23935-201ENSMUST00000102303 57 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms