Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Gm12527-201ENSMUST00000117967 564 ntBASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Gm18421-201ENSMUST00000204122 625 ntBASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rfx4Q7TNK1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx4Q7TNK1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Timm23-208ENSMUST00000226683 750 ntBASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx4Q7TNK1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 BC037039-201ENSMUST00000192003 2205 ntBASIC15.23■□□□□ 0.03
Rfx4Q7TNK1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx4Q7TNK1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms