Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gm14722-201ENSMUST00000118943 689 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gm10499-201ENSMUST00000174094 934 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Mir6977-201ENSMUST00000184960 64 ntBASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup188Q6ZQH8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup188Q6ZQH8 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nup188Q6ZQH8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Gm22175-201ENSMUST00000175007 78 ntBASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup188Q6ZQH8 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.64■□□□□ 0.58
Nup188Q6ZQH8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.64■□□□□ 0.58
Nup188Q6ZQH8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nup188Q6ZQH8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup188Q6ZQH8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms