Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn10aQ6QIY3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn10aQ6QIY3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Mir7684-201ENSMUST00000183858 60 ntBASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn10aQ6QIY3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Gm6415-201ENSMUST00000118488 348 ntBASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Gm13015-201ENSMUST00000118674 204 ntBASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Gm13823-201ENSMUST00000119930 345 ntBASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn10aQ6QIY3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Scn10aQ6QIY3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Gm27680-201ENSMUST00000184192 160 ntBASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn10aQ6QIY3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn10aQ6QIY3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms